Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGACTCCTGTCTTTCCAGCATGCCCTGGGGTGCAGTGGTCA
.(((((((((.((((((((..&))))).......................))).))))).)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_133646
GeneSymbolMAP3K20
Binding site3904,3947
Score0.846
Seed1
Au0.426
Energy-25.6
Binding len43
Me-6.618
Phylopstem-0.27999118
Phylopflank-0.0021818462500000427
Longest consecutive pairings5
Position of longest consecutive pairings38
Pairings in 3prime end6
Position3UTR
2D Structure