Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTAAGGCAGGAGGATCATTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCCAGG
..(((((((((((((((((...&.)))))))))).............))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_133647
GeneSymbolSLC12A6
Binding site5323,5376
Score0.846
Seed1
Au0.426
Energy-26.7
Binding len32
Me-4.957
Phylopstem4.569820766666668
Phylopflank5.69683326375
Longest consecutive pairings10
Position of longest consecutive pairings21
Pairings in 3prime end5
Position3UTR
2D Structure