Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATGTGGCAATTGTGTGCCAT
...(((((((((((((......&.))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_134260
GeneSymbolRORA
Binding site1208,1229
Score0.923
Seed0
Au0.559
Energy-17.2
Binding len16
Me-6.515
Phylopstem2.8551685714285715
Phylopflank2.6539482625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure