Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGTGCTCAGGGATCTCCTAAAACTCTTAAAACAGGGTGGCCAGTA
.(((((((((((((((((((.(&).))))))))......................)))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_134262
GeneSymbolRORA
Binding site5973,6018
Score0.846
Seed1
Au0.618
Energy-21.3
Binding len45
Me-3.793
Phylopstem0.7715995619047616
Phylopflank0.830180235
Longest consecutive pairings8
Position of longest consecutive pairings35
Pairings in 3prime end7
Position3UTR
2D Structure