Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTCATTGCTGGCCGGGC
.((((((...(((((.((....&)))))))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_134425
GeneSymbolSLC26A1
Binding site400,417
Score0.846
Seed1
Au0.368
Energy-17.3
Binding len17
Me-8.639
Phylopstem0.8356106666666667
Phylopflank1.135823871875
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end3
PositionCDS
2D Structure