Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTCGCCCTGAGGCACGGCTACCGGGTGGACAGCAACCAGGAGCTGGTGG
(((((((((((..((.(((((.&.))))).))............))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_134426
GeneSymbolSLC26A6
Binding site1161,1212
Score0.846
Seed1
Au0.338
Energy-26.4
Binding len33
Me-8.807
Phylopstem1.7936050363636367
Phylopflank3.5694845550000003
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure