Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGACAGAAAGCAGGCCAGTT
.(((((((.(((((((..(((.&)))..)))))))..))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_134431
GeneSymbolSLCO1A2
Binding site4162,4184
Score1.0
Seed1
Au0.559
Energy-22.5
Binding len22
Me-4.85
Phylopstem-0.5761771428571428
Phylopflank-0.06442687375000006
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure