Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCAAAGCAGCCAAGGTGAAGCAGAAAGGTAATAGATGCGGTCAGTGA
(((((((((((((((((((((.&)))))..................))))))))..........)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_134470
GeneSymbolIL1RAP
Binding site1244,1294
Score1.0
Seed1
Au0.574
Energy-22.2
Binding len50
Me-3.938
Phylopstem1.779555285714285
Phylopflank1.4859584149999998
Longest consecutive pairings8
Position of longest consecutive pairings19
Pairings in 3prime end7
PositionCDS
2D Structure