Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCAGCAGATTGATATGAGAGGAATGTATCAGCCAGTGG
((((((((((((((..(((((.&))))).............)))))))........))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138270
GeneSymbolATRX
Binding site7450,7491
Score0.808
Seed1
Au0.5
Energy-24.8
Binding len41
Me-4.906
Phylopstem2.323728890909091
Phylopflank1.35118509075
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end5
PositionCDS
2D Structure