Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTGAAAAATTGTTTTGCCAGGA
.(((((((.(((((........&.)))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_138290
GeneSymbolRUNDC3B
Binding site2638,2661
Score0.923
Seed1
Au0.676
Energy-17.2
Binding len16
Me-5.818
Phylopstem-0.0034530285714285797
Phylopflank0.2633566675
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure