Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCGGAGCCTGGGGGGCCTGAGCGGGATCCGCGGCGGTGG
((((((((((((((((((.((.&)))))))))....))))))).................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138290
GeneSymbolRUNDC3B
Binding site431,473
Score0.846
Seed1
Au0.235
Energy-23.6
Binding len42
Me-3.938
Phylopstem1.478146435897436
Phylopflank1.4006555712499997
Longest consecutive pairings9
Position of longest consecutive pairings33
Pairings in 3prime end6
PositionCDS
2D Structure