Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCAGGAGACAGAGCCAC
...((((((.((((((((....&))))))))...)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138294
GeneSymbolPATE1
Binding site1157,1175
Score1.0
Seed0
Au0.5
Energy-18.9
Binding len18
Me-7.757
Phylopstem0.1926262375
Phylopflank0.05153919
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end4
Position3UTR
2D Structure