Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTTCTCAGAAAGATGCCAGTGT
(((((((..(((((((((.((.&)).)))))))))..))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138295
GeneSymbolPKD1L1
Binding site4974,4996
Score0.923
Seed1
Au0.603
Energy-27.5
Binding len22
Me-7.308
Phylopstem0.18298120000000004
Phylopflank0.7348712925
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure