Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCGAGTGGAGCCAC
...(((((((.(((.(((((((&)))))))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138295
GeneSymbolPKD1L1
Binding site6092,6111
Score0.846
Seed0
Au0.353
Energy-27.3
Binding len19
Me-10.075
Phylopstem-0.6335486571428571
Phylopflank-0.6875811099999999
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure