Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCATCCAAAAGGGGGCCCCTTGAGAATGGTGA
(((((((((((((.((((((((&))))))...)).)))))))))..........)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138296
GeneSymbolPTCRA
Binding site909,945
Score0.808
Seed1
Au0.441
Energy-23.0
Binding len36
Me-4.794
Phylopstem-0.3217317391304348
Phylopflank-0.05000861125000004
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end8
Position3UTR
2D Structure