Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCACTCCAGCCCAGGACTGTGGTCTGCCATTGCAATGCAGAGAGCCAGTGT
(((((((((((((((((((...&.))))))))......................)).))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138297
GeneSymbolMUC4
Binding site2323,2377
Score0.923
Seed1
Au0.471
Energy-27.6
Binding len44
Me-3.938
Phylopstem1.0590139952380948
Phylopflank0.8572534812500001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure