Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCCAGAAGAGAGGTTGGTCATTTGTCTTCCAGAAGGTGCTAGA
..(((((.((((((((((((((&)))))))))))..........................))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138316
GeneSymbolPANK1
Binding site4858,4905
Score0.846
Seed0
Au0.588
Energy-25.8
Binding len47
Me-7.271
Phylopstem0.29170707500000004
Phylopflank2.2259988462500004
Longest consecutive pairings11
Position of longest consecutive pairings36
Pairings in 3prime end8
Position3UTR
2D Structure