Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATTCCTGACTGTGAGCCAGGC
.((((((.((((((((((....&)))))).......)))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_138319
GeneSymbolPCSK6
Binding site2478,2503
Score0.846
Seed1
Au0.441
Energy-20.2
Binding len25
Me-6.107
Phylopstem4.258908647058824
Phylopflank4.278725975
Longest consecutive pairings6
Position of longest consecutive pairings19
Pairings in 3prime end4
PositionCDS
2D Structure