Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGGAAGTGTGTGCCAGC
..((((((((((...(((....&)))....)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_138319
GeneSymbolPCSK6
Binding site2619,2637
Score0.846
Seed1
Au0.471
Energy-18.2
Binding len18
Me-7.838
Phylopstem1.7805
Phylopflank2.530041783125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure