Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCAGAAGGTGTGGGCCTTCTGCTTACTGCAGGCCACCTGCCAGGG
.(((((((.....(((((....&.))))).......))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_047422078
GeneSymbolTRIM17
Binding site3257,3305
Score0.846
Seed1
Au0.382
Energy-18.3
Binding len21
Me-13.553
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure