Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCCCACCGACCCACCCAAGGACTGGCCAGTGG
((((((((((((..(((((...&.)))))...)))))...))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138348
GeneSymbolOTULIN
Binding site1060,1096
Score0.846
Seed1
Au0.382
Energy-24.9
Binding len25
Me-6.084
Phylopstem2.688612933333333
Phylopflank4.525755574999999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure