Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCTGGGATCGGGAGTTACACTACCCTGTCCCAAGCCGAGGGGGCCGGTGG
((((((((((((((.((((((.&.)))))).).........))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138350
GeneSymbolTHAP3
Binding site1481,1533
Score0.846
Seed1
Au0.382
Energy-30.2
Binding len32
Me-4.673
Phylopstem-0.033164610434782624
Phylopflank-0.2199108435
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure