Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCACCCCCTGCATTGTGCTGCCATTTGGC
.(((((((((((((((((....&.)))))))))).)))))...)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_138369
GeneSymbolBOD1
Binding site953,983
Score0.846
Seed1
Au0.426
Energy-21.6
Binding len23
Me-3.793
Phylopstem-0.2897856190476191
Phylopflank0.2071063049999999
Longest consecutive pairings10
Position of longest consecutive pairings12
Pairings in 3prime end4
Position3UTR
2D Structure