Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATCCGCAGAGCCATCCTGTGCAAAGGAAGGAGCTAGG
..(((((((((((((..(((.(&.).)))..))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138371
GeneSymbolPCED1B
Binding site658,695
Score0.962
Seed1
Au0.397
Energy-25.6
Binding len22
Me-5.19
Phylopstem-0.05663493846153847
Phylopflank0.04978937624999996
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure