Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTCACTCCCGGGCAGCTTAGAGCAAGGGGGGAGCTGAACTTCGAACAAGATGAGCTGGTGG
(((((((((((((((((((((.&))))))).....................)))))))))).....................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138371
GeneSymbolPCED1B
Binding site836,900
Score0.846
Seed1
Au0.382
Energy-21.0
Binding len64
Me-3.938
Phylopstem2.062473898412698
Phylopflank1.8157533599999995
Longest consecutive pairings10
Position of longest consecutive pairings26
Pairings in 3prime end7
PositionCDS
2D Structure