Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTAGAGTCATAGAAGAGTGATTAGGAGCTTGTGG
(((.(((((((((((((((...&))))))))................))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138376
GeneSymbolTTC5
Binding site3079,3115
Score0.846
Seed0
Au0.588
Energy-23.6
Binding len36
Me-6.97
Phylopstem0.7400044387096776
Phylopflank1.4460689624999996
Longest consecutive pairings8
Position of longest consecutive pairings28
Pairings in 3prime end5
Position3UTR
2D Structure