Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGAGGGGAGGGGCATGAAAATGCAGCTGTGCAGGGTGC
((((..((((((((((((....&))))))))))))........................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138389
GeneSymbolFAM114A1
Binding site327,368
Score0.846
Seed0
Au0.324
Energy-22.3
Binding len41
Me-9.958
Phylopstem0.339772725
Phylopflank0.28077313874999993
Longest consecutive pairings12
Position of longest consecutive pairings29
Pairings in 3prime end4
PositionCDS
2D Structure