Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCGCTCAGACAATGAGAAAACAGATGAGGAGCCCGGAGAATCAGAAGGTGG
((((((((((((((((((((((&))))))..................)))).)))))))).............)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138390
GeneSymbolTMEM169
Binding site343,398
Score0.923
Seed1
Au0.485
Energy-24.5
Binding len55
Me-3.938
Phylopstem3.004444000000001
Phylopflank3.2594945750000006
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end8
PositionCDS
2D Structure