Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCATCCAGAAGGTGGTGCCCAGTGC
(((((((((((((((((((.((&)))))))))))).)).))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138392
GeneSymbolSHKBP1
Binding site1552,1577
Score0.846
Seed1
Au0.426
Energy-23.6
Binding len25
Me-3.938
Phylopstem2.666456504545455
Phylopflank3.706776391249999
Longest consecutive pairings12
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure