Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCTGAGGAGCCGGG
..((((((((((...((((...&)))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138392
GeneSymbolSHKBP1
Binding site593,608
Score0.962
Seed1
Au0.368
Energy-22.5
Binding len15
Me-7.838
Phylopstem2.5250911799999995
Phylopflank2.9933086999999996
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure