Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGGGAGACGTACGAGGAGGACCGGGAGTACGAGAGCCAGG
..((((((((((((((((....&)))))))))..........................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138394
GeneSymbolHNRNPLL
Binding site323,366
Score0.923
Seed1
Au0.338
Energy-23.8
Binding len43
Me-4.957
Phylopstem0.14013240952380954
Phylopflank0.11011076125000002
Longest consecutive pairings9
Position of longest consecutive pairings34
Pairings in 3prime end4
PositionCDS
2D Structure