Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGAAGGAGCCCATGTGG
(((.(((((((((..((((...&)))))))))))))...))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138402
GeneSymbolSP140L
Binding site1596,1616
Score0.923
Seed0
Au0.544
Energy-22.3
Binding len20
Me-8.562
Phylopstem-0.35743838
Phylopflank0.23704272549999994
Longest consecutive pairings13
Position of longest consecutive pairings7
Pairings in 3prime end4
PositionCDS
2D Structure