Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCCACTCAAGACCCGAGACCGAGAGTTCGGCCAGTGG
((((((((...((((.(((...&.))).))))...)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138411
GeneSymbolGARIN5A
Binding site1054,1093
Score0.923
Seed1
Au0.324
Energy-24.3
Binding len21
Me-9.294
Phylopstem0.16337871250000002
Phylopflank0.1499049225
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure