Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCAGAAGGAACAGGGCCC
....(((((((((((((((((.&))))))))))))....))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138413
GeneSymbolHOGA1
Binding site106,128
Score0.846
Seed0
Au0.368
Energy-26.9
Binding len22
Me-9.547
Phylopstem-0.19315285238095237
Phylopflank0.07327522874999998
Longest consecutive pairings12
Position of longest consecutive pairings10
Pairings in 3prime end7
Position5UTR
2D Structure