Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((((.&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138428
GeneSymbolSMIM12
Binding site2092,2115
Score0.846
Seed1
Au0.412
Energy-28.9
Binding len23
Me-10.109
Phylopstem-0.3044701363636364
Phylopflank-0.006174135000000108
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure