Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCAGACTGGAGTGCAGTGG
((((((((((..(((((((((.&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138436
GeneSymbolSMIM19
Binding site925,948
Score0.846
Seed1
Au0.471
Energy-30.3
Binding len23
Me-10.109
Phylopstem-0.10081647272727273
Phylopflank-0.28148721750000005
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure