Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGCCAGGC
.((((((((.............&)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_138454
GeneSymbolNXNL1
Binding site194,203
Score0.846
Seed1
Au0.412
Energy-14.9
Binding len9
Me-14.322
Phylopstem-0.222225875
Phylopflank0.23194569375000007
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure