Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCTTTGAGGATGATCTGAGGAGGGACCTCGGGCGCCAGTT
.((((((((((((((((((((.&))))))...............))))))))........)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138454
GeneSymbolNXNL1
Binding site357,401
Score0.846
Seed1
Au0.338
Energy-24.6
Binding len44
Me-3.793
Phylopstem2.9444968000000005
Phylopflank2.688605108749999
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure