Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCCGGCAGAGGGAGGTGGTGG
(((((.(((((((((((((...&)).))))..))))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138455
GeneSymbolCTHRC1
Binding site241,264
Score0.846
Seed0
Au0.441
Energy-22.2
Binding len23
Me-5.839
Phylopstem1.828139823125
Phylopflank2.747656789125001
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end5
PositionCDS
2D Structure