Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCAAGGGAGGAGGAAGATGG
((((..(((((((((.(((((.&))))).)))))))))..)).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138459
GeneSymbolNUS1
Binding site18,41
Score0.846
Seed0
Au0.309
Energy-23.2
Binding len23
Me-10.191
Phylopstem0.6243470888888889
Phylopflank1.5358750589285712
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
Position5UTR
2D Structure