Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACTCAGAACTGGTGTGAACTGCAAACAGCATATGGGAAGGAGCTT
....(((((((((((((((((.&)))))))))).............................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001346949
GeneSymbolEXO5
Binding site633,680
Score0.846
Seed0
Au0.485
Energy-22.1
Binding len47
Me-9.547
Phylopstem1.722335423913043
Phylopflank1.2022851350000001
Longest consecutive pairings10
Position of longest consecutive pairings37
Pairings in 3prime end7
PositionCDS
2D Structure