Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATCCAGAGCTGTACCATGGCAGAGACAAGAGAAGAGGAGACAGTGT
(((((.(((((((((((((...&)))))))..........................)))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001346949
GeneSymbolEXO5
Binding site359,405
Score0.821
Seed0
Au0.471
Energy-21.8
Binding len46
Me-5.839
Phylopstem0.43386627769230773
Phylopflank0.5789451028750002
Longest consecutive pairings7
Position of longest consecutive pairings39
Pairings in 3prime end5
Position5UTR
2D Structure