Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTTGGGAGGGAACATTCCCCTAGATGACAATGTCAGTGG
(((((((((((((((((((...&))))))))))))....................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138467
GeneSymbolTYW3
Binding site2170,2210
Score0.974
Seed1
Au0.515
Energy-21.5
Binding len40
Me-3.938
Phylopstem-0.12050773846153849
Phylopflank0.17214803500000003
Longest consecutive pairings12
Position of longest consecutive pairings28
Pairings in 3prime end5
Position3UTR
2D Structure