Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGACAAGGAGCCAA
...(((((((((..(((((...&)))))..))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047422226
GeneSymbolHMBOX1
Binding site1437,1454
Score0.974
Seed0
Au0.471
Energy-23.6
Binding len17
Me-8.661
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure