Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTACCTGGAGAAAGGAGTGCCTGG
((...(((((((((((((((((&)))))))..))))))))))...)).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047422226
GeneSymbolHMBOX1
Binding site1041,1066
Score0.846
Seed0
Au0.544
Energy-22.1
Binding len25
Me-12.646
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end8
PositionCDS
2D Structure