Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGAAAGCCACTCCATGAGGAGGCACGGTGA
(((((((((((((((((((...&)))))))............)))))).).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138495
GeneSymbolATXN7L1
Binding site3254,3288
Score0.846
Seed1
Au0.441
Energy-24.6
Binding len34
Me-3.938
Phylopstem4.645872424242424
Phylopflank3.866544772500001
Longest consecutive pairings7
Position of longest consecutive pairings27
Pairings in 3prime end5
Position3UTR
2D Structure