Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTGCGACAGCCTCATGATCTGGCTGCAGA
(((((((((.((((((.((((&.)))).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047422232
GeneSymbolHOOK1
Binding site207,239
Score0.846
Seed1
Au0.471
Energy-21.1
Binding len22
Me-5.18
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure