Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACAGATGTATGCCT
....((((((((.(((((((..&)))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_138554
GeneSymbolTLR4
Binding site5539,5557
Score0.981
Seed0
Au0.691
Energy-20.8
Binding len18
Me-10.836
Phylopstem-0.146615125
Phylopflank0.06389951500000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure