Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCGGGGTTGGGGGCTC
....(((((((((((((((...&))))))))..))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138558
GeneSymbolPPP1R8
Binding site311,329
Score0.897
Seed0
Au0.382
Energy-21.1
Binding len18
Me-9.547
Phylopstem0.5076210170588235
Phylopflank0.5861832447499999
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
Position5UTR
2D Structure