Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTCATTGGAAGCCGGA
..(((((...(((((.((((..&)))))))))...))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_138575
GeneSymbolPGAM5
Binding site595,613
Score0.846
Seed0
Au0.397
Energy-16.9
Binding len18
Me-9.803
Phylopstem4.910762199999999
Phylopflank4.996883508625
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure